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WhaleMap Shiny

WhaleMap

Guide to setting up Hansen's WhaleMap shiny webapp

Prerequisites

See VZ for WhaleMap

add-apt-repository ppa:nextgis/dev
add-apt-repository ppa:ubuntugis/ppa
apt update && apt upgrade

apt install -y libgdal-dev libproj-dev libudunits2-dev pandoc git
R -e "install.packages(c('leaflet', \
                         'rgdal', \
                         'udunits2', \
                         'maptools', \
                         'readxl', \
                         'rgeos', \
                         'googlesheets', \
                         'oce', 'ocedata', \
                         'measurements', \
                         'plotly', \
                         'shinydashboard', \
                         'rhandsontable', \
                         'leaflet.extras', \
                         'lubridate'))"

install rclone
ln -s /opt/rclone-v1.38-linux-amd64/bin/rclone /usr/bin/
scp hansen:.config/rclone/rclone.conf hansen:.config/rclone/

Installation

cd /srv/shiny-server
git clone http://github.com/hansenjohnson/whalemap WhaleMap
cd WhaleMap
rsync -SHaxv whalemap:/srv/shiny-server/data/raw data/  # data archive provided by Hansen
chmod 755 get_remote_data.sh
cp /tmp/password.rds . # provided by Hansen
./get_remote_data.sh